PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma75g00410.1
Common NameZOSMA_75G00410
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 230aa    MW: 25245.8 Da    PI: 5.0181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma75g00410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.4e-1175121554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL+ A + + +L
  Zosma75g00410.1  75 KACREKMRRDRLNDKFVELGSILEPG---KPPKIDKAAILTDAARMVTQL 121
                      678**********************9...99*************999888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.41E-868126No hitNo description
PROSITE profilePS5088812.30370121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.8E-975121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1376145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-1376143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-876127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MGSMENPNWI LDCSLIDEMP VSGADFGATD NAALFWQSPG FDGSSSVPSI DMNGLTESGS  60
RKRARSESQS APGSKACREK MRRDRLNDKF VELGSILEPG KPPKIDKAAI LTDAARMVTQ  120
LKSEAQKLKD SNESLQEKIR ELKSEKIELR DEKQRLKAEK DGLEQQIKVM SMPPSYLPYP  180
PMMPNPFMPP AQAQGGKLMM PSFIGYPGFI PQFQAPANVD DKDELPPAA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931430.11e-93PREDICTED: transcription factor ILR3-like
SwissprotQ9FH376e-73ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0K9NPU61e-167A0A0K9NPU6_Z
STRINGGSMUA_Achr3P23080_0013e-89(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20233885
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-64bHLH family protein